Department of Biology
Graduate Research in Biology
The Department of Biology provides expertise in many areas of the biological sciences ranging from the molecular to the ecosystem. Although individual faculty members differ in their areas of interest, all recognize the constant changes occurring in the understanding of biological processes and the increasingly integrative nature of the sciences. The Master's degree program at Fresno State seeks to capture the dynamic character of the biological sciences through a combination of courses and a research-based thesis. Graduate students in the Master's program select a thesis adviser primarily based on common interests. The thesis, however, represents the unique research interests of each student as guided by the research adviser and thesis committee.
Faculty within the Biology Department address a wide range of questions spanning from the cellular/molecular level to the organismal/ecosystem level. Please contact individual faculty members directly for more information about their research programs and lab availability.
Faculty Research Projects and Lab Availability
| Faculty | Research Discipline | Accepting MS Graduate Students | Number of Openings | Project Descriptions |
|---|---|---|---|---|
| Dr. Francine Arroyo | TBD | 1 | Examing evolutionary trade-ups and trade-offs against antimicrobial resistance. Projects include: 1.Characterizing novel phenotypes that impact biofilm, motility and efflux pumps, 2. Comparing antibiotic resistance evolution between non-pathogens and pathogens. | |
| Dr. Alejandro Calderon-Urrea | Molecular, Cellular and Genetic Systems; Physiological, Behavioral and Developmental Systems | No | 0 | Not accepting graduate students. |
| Dr. Karine Gousset | Molecular, Cellular and Genetic Systems | No | 0 | Not accepting graduate students. |
| Dr. Alexandria Hansen | Biology Education | Fall 2026 | 1-2 |
Projects include: 1. Mobile Making afterschool STEM project with Fresno Unified School District (FUSD): Dr. Hansen has created an afterschool STEM program for FUSD youth in grades 4-6. Fresno State students enrolled in Service-Learning classes visit school sites 5x each semester to facilitate a creative STEM activity that allows youth to make something (i.e., balloon race cars, light-up greeting cards, robots). Research investigates the impact of this experience on both the FUSD youth and Fresno State student facilitators through quantitative (surveys) and qualitative (e.g., observatons, student projects) data. Interested students can assist with the ongoing data collection/analysis and/or assist in developing creative STEM activities for youth. This project is funded by the National Science Foundation; some funding is available for student research assistants. 2. 3D-printing & Fabrication: This project seeks to explore ways that technology and fabrication equipment (i.e., 3D-printing) can be used to enhance life science education acros K-16+. For example, a student might prototype 3D-printing of differnet joints in the human body for use in educational spaces. While there is no funding available for this project, access to fabrication equipment will be provided. Previous experience working with fabrication equipment is preferred, but not required. |
| Dr. Cynthia Hsu | No | 0 |
Not accepting graduate students. |
|
| Dr. David Lent | Molecular, Cellular and Genetic Systems; Physiological, Behavioral and Developmental Systems | No | 0 |
Not accepting graduate students. |
| Dr. Alija Mujic | Environmental, Evolutionary and Ecological Systems; Molecular, Cellular and Genetics Systems | Fall 2026, Spring 2027 | 1-2 |
Projects include: 1. Fungal ecology of oaks ecosystems in the Sierra Nevada foothills and Mountain, 2. Secondary metabolism of antibiotic producing fungi, 3. Edible truffle cultivation in California pecan orchards (pilot studies), 4. Microbial ecology and functional genomics of wetland restoration. |
| Dr. Ulrike Müller | Physiological, Behavioral and Developmental Systems | Fall 2026, Spring 2027 | 1-2 |
Projects include: 1. Predator-prey interactions in the carnivorous plant bladderwort, 2. Form-function relations, 3. Equity and inclusion in academia, case studies in academic publishing, 4. Using natural history collections for research, including history of coloniality. |
| Dr. Larry Riley | No | 0 |
Not accepting graduate students. |
|
| Dr. Joseph Ross | Molecular, Cellular and Genetic Systems; Environmental, Evolutionary and Ecological Systems | Fall 2026, Spring 2027 | 1-2 |
Projects include: 1. The effects of research ethics instruction on ethical research practices in undergraduate STEM students, 2. The ethical application of personal genomics in higher education, 3. The effects of various visual representations of DNA on undergraduate genetics student comprehension, 4. Mechanisms of paternal mitochondrial DNA inheritance in hybrids, 5. Influence of mitochondrial genetics on climate change adaptation, 6. Developing sensitive methods to detect biparental mitochondrial inheritance |
| Dr. Justin Shaffer | No | 0 |
Not accepting graduate students. |
|
| Dr. Hyunjin Shim | Fall 2026 | 2 |
Long-read sequencing of metagenomic samples, including microbiomes. Engineering phages for phage therapy. (Usually recruited from my spring courses) |
|
| Dr. Joel Slade | Environmental, Evolutionary and Ecological Systems; Physiological, Behavioral and Developmental Systems; Molecular, Cellular and Genetic Systems | TBD | 1 |
Ecoimmunology is an emerging interdisciplinary field of biology that integrates the study of evolutionary ecology and immunology. The field focuses on animals and how they interact with their environment and how these interactions influence their immune system. The discipline also explores how pathogens and parasites shape the evolutionary trajectories of an animal’s immune system. We look at factors such as habitat quality, resource availability, temperature, social interactions, and exposure to pollutants can influence an organism's immune function and its ability to combat diseases. Read about us at https://www.sladelab.com/. |
| Dr. Brian Tsukimura | Environmental, Evolutionary and Ecological Systems; Physiological, Behavioral and Developmental Systems | Fall 2026 | 1 |
Climate change physiology, hormonal regulation of reproduction and invasive species. |
| Dr. Emily Walter | Biology Education | Fall 2026, Spring 2027 | 2 | Our research examines how to improve college student success in science through active, student-centered, and creative teaching and learning practices. We explore methods to dismantle mis- and dis-information in biology, ways to improve student understanding, and ways to support diversity, equity, and inclusion in STEM. Most projects in my lab explore features and impacts of interventions in postsecondary education settings (colleges and universities). You can read more at https://www.walterresearchgroup.com/. Students in our lab have gone on to PhD programs, tenure-track teaching positions at community colleges, middle and high school science teaching, industry, and PA/MD professional programs. |
| Dr. Katherine Waselkov | Environmental, Evolutionary and Ecological Systems; Molecular, Cellular and Genetic Systems | Fall 2026, Spring 2027 | 1 |
Plant evolution, plant taxonomy, population genetics/genomics, phylogenetics, and natural history collection curation. Projects include: 1. Comparing the genomics and physiology of related agriculturally weedy and non-weedy species of amaranths, and science outreach via iNaturalist, 2. Floristics and herbarium curation. Grant funding may be available for graduate students. |
| Dr. Hwan Youn | Molecular, Cellular and Genetic Systems | Fall 2026, Spring 2027 | 1-2 |
Identification of amino acids critical for the function of cAMP receptor protein, a model bacterial transcription factor (DNA binding and transcriptional activation functions). Projects include: 1. Creating site-directed mutants for the CRP protein to replace original amino acid targets with functionally different amino acids, 2. Measuring DNA binding and/or transcritpional activation activities for the mutants to determine if the original amino acids are important for DNA binding and/or transcriptional activation. |
Our faculty have collaborated with researchers at a broad array of national and international universities and receive funding a range of federal (e.g., National Institutes of Health, National Science Foundation, U.S. Fish and Wildlife Service, Department of Defense, National Aeronautics and Space Administration, U.S. Department of Agriculture, and the Environmental Protection Agency) and state agencies (e.g., California Fish and Game Department, California Agriculture and Technology Institute, California Department of Water Resources ) along with a range of industry groups.
Student completing the M.S. degree are prepared to a diverse array of career opportunities in the biological sciences including continuation to a Ph.D. degree. Training in the biological sciences provides opportunities in a range of employment sectors including government, industry, and education. Specific employment areas may include laboratory management, quality control, environmental management and conservation, the biotechnology industry, health care research, ecology, agricultural production and inspection, pest control, and marine sciences among others.